Openscience AI Agent
by synthetic-sciencesThe open-source AI workbench for scientific research
Openscience is an open-source ai agent by synthetic-sciences, written mainly in TypeScript, with 4,320 GitHub stars and the Apache-2.0 license. Its code was last updated Oct 30, 2026.
Scan summary: scanned Nov 5, 2026 at commit a08e0ad. Seen able to run shell commands, run dynamic code, read environment and secrets, connect to the internet. Scan policy
ScannedScanned. The automated checks below ran on the commit shown. Read each line for what was and was not covered.
Full scan at
a08e0ad · Nov 5, 2026 ScannedStatic, secrets and dependency checks completed with no critical findings.
Warning. This check found something worth reading in the findings below. It is not proof of a problem.Static code scanwarnWarning. This check found something worth reading in the findings below. It is not proof of a problem.
Passed. This check ran and found nothing it flags.Secrets scanpassPassed. This check ran and found nothing it flags.
Flagged. This check found an issue. See the findings below.Dependency audit191 known vulnerabilitiesfailFlagged. This check found an issue. See the findings below.
Warning. This check found something worth reading in the findings below. It is not proof of a problem.ManifestnonewarnWarning. This check found something worth reading in the findings below. It is not proof of a problem.
Flagged. This check found an issue. See the findings below.BuildfailFlagged. This check found an issue. See the findings below.
Not applicable. This check does not apply to this kind of project, or it was not run in this scan.Boot & handshaken/aNot applicable. This check does not apply to this kind of project, or it was not run in this scan.
Not applicable. This check does not apply to this kind of project, or it was not run in this scan.Network egressn/aNot applicable. This check does not apply to this kind of project, or it was not run in this scan.
Not applicable. This check does not apply to this kind of project, or it was not run in this scan.Reproducible (×3)n/aNot applicable. This check does not apply to this kind of project, or it was not run in this scan.
Findings (109)
- highHigh. Something risky that needs a close look before you install.code-execution issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.credential-access issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.credential-access issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.credential-access issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.credential-access issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.credential-access issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.credential-access issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.credential-access issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.credential-access issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.exfiltration issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dropper issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dependencies issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dependencies issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dependencies issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dependencies issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dependencies issueDetails are available to the maintainer after claiming this listing.
- highHigh. Something risky that needs a close look before you install.dependencies issueDetails are available to the maintainer after claiming this listing.
- mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.Runs shell commands. Fine for some tools, but it means the agent can run anything your user can.
backend/cli/script/preinstall.mjs:17 - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.fsspec@2025.3.0: 1 known vulnerabilityPYSEC-2026-4217
backend/cli/skills/ml-training/hugging-face-evaluation/requirements.txt - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.httpcore2@2.9.1: 1 known vulnerabilityPYSEC-2026-3844
backend/cli/skills/ml-training/hugging-face-evaluation/requirements.txt - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.httpx2@2.9.1: 5 known vulnerabilitiesPYSEC-2026-3845, PYSEC-2026-3846, PYSEC-2026-3847, PYSEC-2026-3848, PYSEC-2026-3849
backend/cli/skills/ml-training/hugging-face-evaluation/requirements.txt - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.urllib3@1.26.9: 10 known vulnerabilitiesPYSEC-2023-192, PYSEC-2023-212, PYSEC-2026-141, PYSEC-2026-1994, PYSEC-2026-1995 +5 more
backend/cli/skills/ml-training/hugging-face-evaluation/requirements.txt - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.@grpc/grpc-js@1.14.4: 2 known vulnerabilitiesGHSA-f596-whhp-79r4, GHSA-m9gg-hp2v-232j
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.body-parser@2.3.0: 1 known vulnerabilityGHSA-27r3-jxmh-p828
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.brace-expansion@5.0.9: 3 known vulnerabilitiesGHSA-6j4f-fj2g-mc7p, GHSA-q2hr-2g5m-vwhr, GHSA-qhr7-859c-m2p7
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.browserslist@4.28.2: 2 known vulnerabilitiesGHSA-73wf-gq98-2v4g, GHSA-c83g-rgw3-j3cx
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.compression@1.8.1: 1 known vulnerabilityGHSA-vc2v-76pw-4v95
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.electron@44.5.1: 1 known vulnerabilityGHSA-jr5w-w6x2-84p9
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.fast-uri@3.1.5: 10 known vulnerabilitiesGHSA-333x-w4r6-6crp, GHSA-5jgf-p345-68v8, GHSA-f65p-4m7j-42xc, GHSA-fph4-wmhf-6fwf, GHSA-hrr3-gc8f-f4qj +5 more
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.happy-dom@20.9.0: 3 known vulnerabilitiesGHSA-5fpq-26gf-qwcr, GHSA-834v-8h66-3h79, GHSA-c8p4-j97h-3vg8
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.js-yaml@4.3.1: 1 known vulnerabilityGHSA-2883-xcg3-v3hh
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.source-map-js@1.2.1: 1 known vulnerabilityGHSA-68fv-2mgg-jv7q
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.undici@7.25.0: 29 known vulnerabilitiesGHSA-2gqq-gqf2-x968, GHSA-2jfj-6hjv-fm6j, GHSA-2m5v-pch6-74hx, GHSA-35p6-xmwp-9g52, GHSA-3xpg-4rpp-hhhm +24 more
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.vite@7.3.6: 5 known vulnerabilitiesGHSA-587h-7wmj-h5pm, GHSA-698v-4r3x-3vcv, GHSA-9jrq-w75r-8gcw, GHSA-r825-w8mm-5pxw, GHSA-rq7h-c2jc-7f22
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.zod@3.25.76: 1 known vulnerabilityGHSA-mrhx-c7xc-m3w5
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.zod@4.1.8: 1 known vulnerabilityGHSA-mrhx-c7xc-m3w5
bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.vite@5.4.21: 8 known vulnerabilitiesGHSA-4w7w-66w2-5vf9, GHSA-587h-7wmj-h5pm, GHSA-698v-4r3x-3vcv, GHSA-9jrq-w75r-8gcw, GHSA-fx2h-pf6j-xcff +3 more
frontend/landing/bun.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.aiohttp@3.14.3: 8 known vulnerabilitiesGHSA-2g87-pp6c-29x5, GHSA-494j-54xm-rwp3, GHSA-5wr8-gcqf-gqf3, GHSA-6cjc-53gc-5rqm, GHSA-9xw5-w5jj-pvcg +3 more
tooling/harbor/uv.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.filelock@3.32.6: 13 known vulnerabilitiesGHSA-567q-5qvw-pf92, GHSA-6627-m3xw-93mp, GHSA-69hj-f68j-2879, GHSA-8mx5-7m5m-r77g, GHSA-9c4x-gm8v-wgc4 +8 more
tooling/harbor/uv.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.pyjwt@2.14.0: 2 known vulnerabilitiesPYSEC-2026-4141, PYSEC-2026-4183
tooling/harbor/uv.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.urllib3@2.7.0: 3 known vulnerabilitiesPYSEC-2026-4175, PYSEC-2026-4176, PYSEC-2026-4177
tooling/harbor/uv.lock - mediumMedium. Worth checking, often a vulnerable dependency or a setup problem.Install or build failed in a clean environmentnpm error code EUNSUPPORTEDPROTOCOL npm error Unsupported URL Type "catalog:": catalog: npm error A complete log of this run can be found in: /tmp/home/.npm/_logs/2026-11-05T18_26_28_436Z-debug-0.log
- lowLow. Minor, or common in normal tools. Shown for information.In tests/examples/docs: Downloads a script and pipes it straight into a shell (often an installer command shown to users; check where it runs).
backend/cli/src/skill/install/__tests__/review-regex.test.ts:43 - lowLow. Minor, or common in normal tools. Shown for information.In tests/examples/docs: Downloads a script and pipes it straight into a shell (often an installer command shown to users; check where it runs).
backend/cli/src/skill/install/__tests__/review-regex.test.ts:44 - lowLow. Minor, or common in normal tools. Shown for information.In tests/examples/docs: Touches a sensitive credential location (SSH keys, cloud credentials, browser data or wallets). Expected for some tools, such as browser automation; check why.
backend/cli/src/skill/install/__tests__/review-regex.test.ts:52 - lowLow. Minor, or common in normal tools. Shown for information.In tests/examples/docs: Executes dynamically built code (eval / new Function / vm).
frontend/ui/src/components/atom-loader.test.ts:181 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-header
backend/cli/skills/biology/benchling-integration/references/api_endpoints.md:31 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-user
backend/cli/skills/biology/benchling-integration/references/api_endpoints.md:24 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-header7 matches in this file
backend/cli/skills/biology/protocolsio-integration/references/file_manager.md:41 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-header4 matches in this file
backend/cli/skills/biology/protocolsio-integration/references/protocols_api.md:45 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-header6 matches in this file
backend/cli/skills/biology/protocolsio-integration/references/additional_features.md:31 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-header3 matches in this file
backend/cli/skills/biology/protocolsio-integration/references/workspaces.md:32 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-header3 matches in this file
backend/cli/skills/biology/benchling-integration/references/authentication.md:112 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-user2 matches in this file
backend/cli/skills/biology/benchling-integration/references/authentication.md:36 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-header3 matches in this file
backend/cli/skills/biology/protocolsio-integration/references/discussions.md:44 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key2 matches in this file
backend/cli/skills/databases/reactome-database/references/api_reference.md:163 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-header
backend/cli/skills/databases/uspto-database/references/patentsearch_api.md:173 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: curl-auth-header
backend/cli/skills/ml-inference/sglang/references/deployment.md:342 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key
backend/cli/skills/other/hugging-face-jobs/references/token_usage.md:344 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key
backend/cli/skills/ml-training/bitsandbytes/references/qlora-training.md:180 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key7 matches in this file
backend/cli/skills/ml-training/unsloth/docs/fp16-vs-bf16.md:7 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key4 matches in this file
backend/cli/skills/ml-training/unsloth/docs/kimi-k2.5.md:165 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key12 matches in this file
backend/cli/skills/ml-training/unsloth/docs/fp8-rl.md:21 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key7 matches in this file
backend/cli/skills/ml-training/unsloth/docs/glm-4.7-flash.md:622 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key17 matches in this file
backend/cli/skills/ml-training/unsloth/docs/kernels-packing.md:20 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key10 matches in this file
backend/cli/skills/ml-training/unsloth/docs/qwen3-coder-next.md:547 - lowLow. Minor, or common in normal tools. Shown for information.Possible example credential in docs/tests: generic-api-key30 matches in this file
backend/cli/test/science/fixtures/fetch/crossref.json:183 - lowLow. Minor, or common in normal tools. Shown for information.@ai-sdk/provider-utils@3.0.20: 1 known vulnerabilityGHSA-866g-f22w-33x8
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.@hono/node-server@1.19.15: 1 known vulnerabilityGHSA-rmxm-3fg6-px4f
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.baseline-browser-mapping@2.10.33: 1 known vulnerabilityGHSA-w5vr-8v7q-w6rv
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.glob@11.1.0: 1 known vulnerabilityGHSA-3g3m-2fjr-6pw4
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.hono@4.12.34: 5 known vulnerabilitiesGHSA-5r4p-p66f-jhc7, GHSA-crvj-82cr-hjcx, GHSA-g6gw-c38x-mqfc, GHSA-gqvv-2mrq-wpjv, GHSA-hxh3-vqpv-xpqv
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.ip-address@10.5.0: 5 known vulnerabilitiesGHSA-2vr4-cq9g-pvrc, GHSA-h3mg-xc3c-68pw, GHSA-j6r3-76f7-8jcv, GHSA-rpw4-54j3-4h4q, GHSA-rxp7-6hxx-x8q5
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.katex@0.16.27: 1 known vulnerabilityGHSA-238p-pmpm-9mq7
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.katex@0.17.0: 1 known vulnerabilityGHSA-238p-pmpm-9mq7
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.minimatch@10.2.5: 1 known vulnerabilityGHSA-g3hv-75wg-m249
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.minimatch@9.0.9: 1 known vulnerabilityGHSA-g3hv-75wg-m249
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.qs@6.15.2: 3 known vulnerabilitiesGHSA-4mjr-xmp4-gh2g, GHSA-6pq8-jhm2-2vcw, GHSA-x5fp-wj9c-mxmx
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.seroval@1.6.9: 2 known vulnerabilitiesGHSA-9wx9-5pv9-3349, GHSA-f86p-h4j2-7qgj
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.smol-toml@1.7.1: 1 known vulnerabilityGHSA-r4xh-jqrq-34v2
bun.lock - lowLow. Minor, or common in normal tools. Shown for information.esbuild@0.21.5: 1 known vulnerabilityGHSA-67mh-4wv8-2f99
frontend/landing/bun.lock - lowLow. Minor, or common in normal tools. Shown for information.postcss-selector-parser@6.1.4: 1 known vulnerabilityGHSA-rj75-hqrm-r3gf
frontend/landing/bun.lock - lowLow. Minor, or common in normal tools. Shown for information.multidict@6.8.0: 1 known vulnerabilityPYSEC-2026-4244
tooling/harbor/uv.lock - lowLow. Minor, or common in normal tools. Shown for information.package.json has a prepare scripthusky
package.json - lowLow. Minor, or common in normal tools. Shown for information.No manifest declaring network access and environment variables (agent.json)
- infoInfo. A note about the project, not a problem.Ignored the repo's scanner suppression config (1 file).gitleaksignore
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