CyteType AI Agent
by NygenAnalyticsMulti-agent LLM driven cell type annotation for single-cell RNA-Seq data
CyteType is an open-source ai agent by NygenAnalytics, written mainly in Python, with 139 GitHub stars and the BSD-3-Clause license. Its code was last updated Oct 29, 2026. The latest PyPI release is cytetype 0.21.0, published Oct 18, 2026, with 52 downloads last week.
Scan summary: scanned Nov 5, 2026 at commit c4a77dd. No capabilities flagged by our checks. Scan policy
What CyteType can touch
- Our checks did not find this. The tool may still do it.Run shell commandsNot seen in this scan
- Our checks did not find this. The tool may still do it.Run dynamic codeNot seen in this scan
- Our checks did not find this. The tool may still do it.Read or write filesNot seen in this scan
- Our checks did not find this. The tool may still do it.Read environment and secretsNot seen in this scan
- Our checks did not find this. The tool may still do it.Control a web browserNot seen in this scan
- Our checks did not find this. The tool may still do it.Connect to databasesNot seen in this scan
- Our checks did not find this. The tool may still do it.Read or send messagesNot seen in this scan
- Our checks did not find this. The tool may still do it.Touch money or tradingNot seen in this scan
- Our checks did not find this. The tool may still do it.Connect to the internetNot run in this scan
"Not seen" means our checks did not find it, and the tool may still do it. Covers commit c4a77dd, Nov 5, 2026. See the scan policy.
Before you install CyteType
AgenticMart scanned CyteType on Nov 5, 2026 with automated checks for hidden code, known-malicious packages, leaked secrets and vulnerable dependencies. The result covers one commit under our scan policy, so review what access you give it and check any advisories shown here.
What it can access
- An AI agent decides its own next steps and calls whatever tools you give it, so its risk depends on the access you grant.
- Based on its description and topics, it likely needs to read or change your workspace data (docs, tickets, CRM).
Before you install
- Connect it to a test workspace before your real one.
- Pin the version you reviewed instead of always installing the latest release.
- Read the tool list or scripts before the first run, and keep approval prompts on for actions that write, send or delete.
- Maintained by NygenAnalytics on GitHub, 139 stars and 15 forks. Popularity is not proof of safety.
- Last code change: Oct 29, 2026.
- Open-source license: BSD-3-Clause.
CyteType is an open-source ai agent by NygenAnalytics, written mainly in Python. Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data
At a glance
- Stars
- 139
- Forks
- 15
- Language
- Python
- License
- BSD-3-Clause
- Created
- Apr 2025
- Last update
- Oct 29, 2026
- Type
- AI Agent
- Price
- Free
Topics
Questions about CyteType
What is CyteType?
Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data
Who maintains CyteType?
CyteType is maintained by NygenAnalytics on GitHub (NygenAnalytics/CyteType). AgenticMart lists it from public repository data.
Is CyteType safe to use?
AgenticMart scanned CyteType on Nov 5, 2026 with automated checks for hidden code, known-malicious packages, leaked secrets and vulnerable dependencies. The result covers one commit under our scan policy, so review what access you give it and check any advisories shown here.
What license does CyteType use?
It is published under the BSD-3-Clause license.
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|---|---|---|---|---|
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